COVID-19 is an infection caused by _______, which is a _______ and causes respiratory and systemic disease ranging from asymptomatic to critical illness.
COVID-19 is an infection caused by SARS‑CoV‑2, which is a positive-sense RNA coronavirus and causes respiratory and systemic disease ranging from asymptomatic to critical illness.
Key steps in COVID-19 pathogenesis: - Virus binds _______ via the _______ and enters respiratory epithelium - Replication triggers _______ - Severe disease: _______ causing ARDS, multiorgan injury and coagulopathy
Key steps in COVID-19 pathogenesis: - Virus binds ACE2 receptor via the spike protein and enters respiratory epithelium - Replication triggers immune response - Severe disease: cytokine storm causing ARDS, multiorgan injury and coagulopathy
ARDS in COVID-19 is _______ from a "cytokine storm" within _______ of COVID, often with _______.
ARDS in COVID-19 is hypoxaemic respiratory failure from a "cytokine storm" within 1 week of COVID, often with bilateral opacities on CXR.
Symptoms of COVID-19 by severity: - Mild: _______ - Moderate: _______ - Severe: _______
Symptoms of COVID-19 by severity: - Mild: fever, cough, fatigue, anosmia, myalgia, sore throat - Moderate: SOB and O2 sat 90–94% - Severe: hypoxia <90%, ARDS, multi-organ failure
Extra-respiratory manifestations of COVID-19 include _______.
Extra-respiratory manifestations of COVID-19 include GI (diarrhoea/nausea), neuro (headache, confusion, anosmia), cardiac (myocarditis), and skin (rashes/COVID toes).
Major risk factors for severe COVID-19 include _______.
Major risk factors for severe COVID-19 include age >65, male sex, comorbidities (DM, CKD, COPD, CVD, obesity), immunosuppression, third trimester pregnancy, and unvaccinated status.
Investigations commonly show _______, raised _______, possible _______, raised _______, and _______ in severe disease; diagnostic test: _______.
Investigations commonly show lymphopenia, raised CRP and D-dimer, possible mild thrombocytopenia, raised ferritin/LDH, and troponin in severe disease; diagnostic test: RT-PCR nasopharyngeal swab.
Oxygen therapy target for most COVID-19 patients is SpO2 _______, with stepwise escalation: _______.
Oxygen therapy target for most COVID-19 patients is SpO2 92–96%, with stepwise escalation: nasal cannula → face mask → high-flow nasal O2 → CPAP → mechanical ventilation.
First-line treatments: _______ for those needing oxygen; _______ for hospitalised patients on O2 if symptom onset is <7 days. Second-line: _______ for systemic inflammation and _______ in hospitalised patients. Prevention: _______.

First-line treatments: dexamethasone for those needing oxygen; IV remdesivir for hospitalised patients on O2 if symptom onset is <7 days. Second-line: tocilizumab for systemic inflammation and prophylactic LMWH/UFH in hospitalised patients. Prevention: vaccine.

Influenza is an acute viral respiratory infection caused by _______ or _______ viruses.
Influenza is an acute viral respiratory infection caused by influenza A or influenza B viruses.
Key steps in influenza pathogenesis: - Virus binds respiratory epithelial cells via _______ - _______ → cell death and airway inflammation - _______ causes systemic symptoms
Key steps in influenza pathogenesis: - Virus binds respiratory epithelial cells via Hemagglutinin (HA) - Viral replication → cell death and airway inflammation - Host immune response causes systemic symptoms
Common systemic symptoms of influenza include _______, _______, _______, _______ and _______.
Common systemic symptoms of influenza include fever, chills, myalgia, headache and malaise.
Respiratory and less common GI symptoms of influenza: - Respiratory: _______, _______, _______ - GI (less common): _______, _______, _______
Respiratory and less common GI symptoms of influenza: - Respiratory: cough, sore throat, nasal congestion - GI (less common): nausea, vomiting, diarrhea
Major complications of influenza include _______, _______, _______, _______ and _______.
Major complications of influenza include viral or secondary pneumonia, COPD/asthma exacerbation, myocarditis, encephalitis and multi organ failure.
Key risk groups for severe influenza are people _______, _______, with _______, _______ and residents of _______.
Key risk groups for severe influenza are people over 65 years, pregnant, with chronic heart, lung, liver, or renal disease, immunocompromised and residents of long-term care facilities.
Investigations for suspected influenza: clinical diagnosis in mild cases; for confirmation use _______. In severe cases consider _______ and _______ if pneumonia is suspected.
Investigations for suspected influenza: clinical diagnosis in mild cases; for confirmation use RT-PCR from nasopharyngeal swab. In severe cases consider FBC, CRP and CXR if pneumonia is suspected.
Treatment and prevention: First-line is supportive care and _______ for fever. If severe/hospitalised or immunocompromised, aim within 48 hours to give _______ or _______. Prevention: _______ (live attenuated in children, inactivated in adults).
Treatment and prevention: First-line is supportive care and paracetamol for fever. If severe/hospitalised or immunocompromised, aim within 48 hours to give oseltamivir (oral) or zanamivir (inhaled). Prevention: annual influenza vaccine (live attenuated in children, inactivated in adults).
Influenza classification includes Types, Subtypes/Lineages, Clades and Sub-clades. The provided diagram illustrates these groupings:
Which hierarchical groups are shown in the diagram? _______
Influenza classification includes Types, Subtypes/Lineages, Clades and Sub-clades. The provided diagram illustrates these groupings:
Which hierarchical groups are shown in the diagram? Types, Subtypes/Lineages, Clades, Sub-clades
Upper respiratory tract infections (URTIs) are acute infections affecting structures above the vocal cords: _______, _______, _______ or _______.
Upper respiratory tract infections (URTIs) are acute infections affecting structures above the vocal cords: nose, pharynx, larynx or sinuses.
Common clinical types of URTIs include: - _______ - _______ - _______ - _______ - _______ - _______
Common clinical types of URTIs include: - Common cold - Pharyngitis/Tonsillitis - Laryngitis - Sinusitis/rhinosinusitis - Otitis media/eustachian tube dysfunction - Epiglottitis
Typical URTI symptoms include: _______, _______, _______, _______ and sometimes _______.
Typical URTI symptoms include: nasal congestion, rhinorrhoea, sore throat, cough and sometimes low-grade fever.
Red-flag URTI signs requiring urgent attention: _______, _______, _______, _______, _______, _______. 
Red-flag URTI signs requiring urgent attention: stridor, drooling, severe pain, high fever, neck stiffness, immunosuppression. 
URTI risk factors include being _______, _______, having _______, seasonal peaks (_______), _______ and _______.
URTI risk factors include being young, immunosuppressed, having asthma/COPD, seasonal peaks (winter viruses), smoking and close contact.
Investigations for mild URTI are _______; if severe/atypical consider _______ (strep culture/rapid antigen) and _______ (viral PCR for COVID/influenza).
Investigations for mild URTI are clinical; if severe/atypical consider throat swab (strep culture/rapid antigen) and nasopharyngeal swab (viral PCR for COVID/influenza).
First-line supportive URTI treatment: _______, _______, _______ or _______ plus analgesics/antipyretics (_______, _______).
First-line supportive URTI treatment: rest, hydration, saline nasal spray or steam inhalation plus analgesics/antipyretics (paracetamol, ibuprofen).
Recommended antibiotics for specific bacterial URTIs: _______ for strep throat (Group A), _______ for bacterial sinusitis and _______ for otitis media.
Recommended antibiotics for specific bacterial URTIs: Phenoxymethylpenicillin for strep throat (Group A), Amoxicillin for bacterial sinusitis and Amoxicillin for otitis media.
Antiviral guidance: _______ is indicated for influenza in _______ patients.
Antiviral guidance: Oseltamivir is indicated for influenza in high-risk patients.
Lower respiratory tract infections (LRTIs) are infections below the larynx involving: - _______ - _______ - _______
Lower respiratory tract infections (LRTIs) are infections below the larynx involving: - trachea - bronchi/bronchioles - lung parenchyma (alveoli)
Common types of LRTIs include: - _______ - _______ - _______ - _______ - _______ - _______ - _______
Common types of LRTIs include: - Acute bronchitis - Bronchiolitis - Community-acquired pneumonia (CAP) - Healthcare-associated pneumonia (HAP) - Ventilator-associated pneumonia (VAP) - Exacerbation of COPD - COVID-19 / Influenza pneumonia
Typical viral causes listed for acute bronchitis and bronchiolitis include: _______, _______, _______, _______, _______
Typical viral causes listed for acute bronchitis and bronchiolitis include: influenza A/B, RSV, COVID, adenovirus, parainfluenza
Common bacterial pathogens causing community-acquired pneumonia (CAP) are _______ and _______.
Common bacterial pathogens causing community-acquired pneumonia (CAP) are Streptococcus pneumoniae and Haemophilus influenzae.
Key symptoms of LRTIs include: - _______ - _______ - _______ - _______ - _______ - _______
Key symptoms of LRTIs include: - Cough - Fever / chills - Dyspnoea - Wheeze - Pleuritic chest pain - Fatigue / malaise
Risk factors for LRTIs include: _______, age _______, chronic lung disease (_______), _______, _______, _______, and _______ stay.
Risk factors for LRTIs include: Smoking, age <5 or >65, chronic lung disease (COPD & Asthma), bronchiectasis, diabetes mellitus, immunosuppression, and recent hospital stay.
Investigations for suspected LRTI include blood tests: _______, _______, _______, _______, plus _______ and _______ and _______ for influenza/COVID, and _______ for imaging.
Investigations for suspected LRTI include blood tests: FBC, CRP, U&E, LFT, plus sputum culture and blood culture if severe and viral PCR for influenza/COVID, and CXR for imaging.
A chest X-ray showing consolidation suggests _______.
A chest X-ray showing consolidation suggests pneumonia.
First-line antibiotic for uncomplicated acute bronchitis given here is _______.
First-line antibiotic for uncomplicated acute bronchitis given here is Amoxicillin.
Empirical treatment for CAP in moderate disease is _______ and for severe CAP is _______.
Empirical treatment for CAP in moderate disease is co-amoxiclav + doxycycline/clarithromycin and for severe CAP is benzylpenicillin + clarithromycin.
HAP treatment: early (<5 days) options include _______; late-onset or high-risk HAP uses _______.
HAP treatment: early (<5 days) options include co-amoxiclav OR doxycycline; late-onset or high-risk HAP uses piperacillin-tazobactam (Tazocin).
VAP recommended empirical therapy is _______, adding _______ if there is MRSA risk.
VAP recommended empirical therapy is piperacillin-tazobactam (Tazocin), adding vancomycin if there is MRSA risk.
For COPD exacerbation, antibiotics are recommended only if there is increased _______ and _______; first-line is _______ and second-line _______.
For COPD exacerbation, antibiotics are recommended only if there is increased sputum purulence, sputum volume and dyspnoea; first-line is doxycycline and second-line amoxicillin.
COVID-19 is an infection caused by SARS‑CoV‑2, which is a positive-sense RNA coronavirus and causes respiratory and systemic disease ranging from asymptomatic to critical illness.
Key steps in COVID-19 pathogenesis: - Virus binds ACE2 receptor via the spike protein and enters respiratory epithelium - Replication triggers immune response - Severe disease: cytokine storm causing ARDS, multiorgan injury and coagulopathy
ARDS in COVID-19 is hypoxaemic respiratory failure from a "cytokine storm" within 1 week of COVID, often with bilateral opacities on CXR.
Symptoms of COVID-19 by severity: - Mild: fever, cough, fatigue, anosmia, myalgia, sore throat - Moderate: SOB and O2 sat 90–94% - Severe: hypoxia <90%, ARDS, multi-organ failure
Extra-respiratory manifestations of COVID-19 include GI (diarrhoea/nausea), neuro (headache, confusion, anosmia), cardiac (myocarditis), and skin (rashes/COVID toes).
Major risk factors for severe COVID-19 include age >65, male sex, comorbidities (DM, CKD, COPD, CVD, obesity), immunosuppression, third trimester pregnancy, and unvaccinated status.
Investigations commonly show lymphopenia, raised CRP and D-dimer, possible mild thrombocytopenia, raised ferritin/LDH, and troponin in severe disease; diagnostic test: RT-PCR nasopharyngeal swab.
Oxygen therapy target for most COVID-19 patients is SpO2 92–96%, with stepwise escalation: nasal cannula → face mask → high-flow nasal O2 → CPAP → mechanical ventilation.
First-line treatments: dexamethasone for those needing oxygen; IV remdesivir for hospitalised patients on O2 if symptom onset is <7 days. Second-line: tocilizumab for systemic inflammation and prophylactic LMWH/UFH in hospitalised patients. Prevention: vaccine.

Key steps in influenza pathogenesis: - Virus binds respiratory epithelial cells via Hemagglutinin (HA) - Viral replication → cell death and airway inflammation - Host immune response causes systemic symptoms
Respiratory and less common GI symptoms of influenza: - Respiratory: cough, sore throat, nasal congestion - GI (less common): nausea, vomiting, diarrhea
Major complications of influenza include viral or secondary pneumonia, COPD/asthma exacerbation, myocarditis, encephalitis and multi organ failure.
Key risk groups for severe influenza are people over 65 years, pregnant, with chronic heart, lung, liver, or renal disease, immunocompromised and residents of long-term care facilities.
Investigations for suspected influenza: clinical diagnosis in mild cases; for confirmation use RT-PCR from nasopharyngeal swab. In severe cases consider FBC, CRP and CXR if pneumonia is suspected.
Treatment and prevention: First-line is supportive care and paracetamol for fever. If severe/hospitalised or immunocompromised, aim within 48 hours to give oseltamivir (oral) or zanamivir (inhaled). Prevention: annual influenza vaccine (live attenuated in children, inactivated in adults).
Influenza classification includes Types, Subtypes/Lineages, Clades and Sub-clades. The provided diagram illustrates these groupings:
Which hierarchical groups are shown in the diagram? Types, Subtypes/Lineages, Clades, Sub-clades
Upper respiratory tract infections (URTIs) are acute infections affecting structures above the vocal cords: nose, pharynx, larynx or sinuses.
Common clinical types of URTIs include: - Common cold - Pharyngitis/Tonsillitis - Laryngitis - Sinusitis/rhinosinusitis - Otitis media/eustachian tube dysfunction - Epiglottitis
Typical URTI symptoms include: nasal congestion, rhinorrhoea, sore throat, cough and sometimes low-grade fever.
Red-flag URTI signs requiring urgent attention: stridor, drooling, severe pain, high fever, neck stiffness, immunosuppression. 
URTI risk factors include being young, immunosuppressed, having asthma/COPD, seasonal peaks (winter viruses), smoking and close contact.
Investigations for mild URTI are clinical; if severe/atypical consider throat swab (strep culture/rapid antigen) and nasopharyngeal swab (viral PCR for COVID/influenza).
First-line supportive URTI treatment: rest, hydration, saline nasal spray or steam inhalation plus analgesics/antipyretics (paracetamol, ibuprofen).
Recommended antibiotics for specific bacterial URTIs: Phenoxymethylpenicillin for strep throat (Group A), Amoxicillin for bacterial sinusitis and Amoxicillin for otitis media.
Lower respiratory tract infections (LRTIs) are infections below the larynx involving: - trachea - bronchi/bronchioles - lung parenchyma (alveoli)
Common types of LRTIs include: - Acute bronchitis - Bronchiolitis - Community-acquired pneumonia (CAP) - Healthcare-associated pneumonia (HAP) - Ventilator-associated pneumonia (VAP) - Exacerbation of COPD - COVID-19 / Influenza pneumonia
Typical viral causes listed for acute bronchitis and bronchiolitis include: influenza A/B, RSV, COVID, adenovirus, parainfluenza
Common bacterial pathogens causing community-acquired pneumonia (CAP) are Streptococcus pneumoniae and Haemophilus influenzae.
Key symptoms of LRTIs include: - Cough - Fever / chills - Dyspnoea - Wheeze - Pleuritic chest pain - Fatigue / malaise
Risk factors for LRTIs include: Smoking, age <5 or >65, chronic lung disease (COPD & Asthma), bronchiectasis, diabetes mellitus, immunosuppression, and recent hospital stay.
Investigations for suspected LRTI include blood tests: FBC, CRP, U&E, LFT, plus sputum culture and blood culture if severe and viral PCR for influenza/COVID, and CXR for imaging.
Empirical treatment for CAP in moderate disease is co-amoxiclav + doxycycline/clarithromycin and for severe CAP is benzylpenicillin + clarithromycin.
HAP treatment: early (<5 days) options include co-amoxiclav OR doxycycline; late-onset or high-risk HAP uses piperacillin-tazobactam (Tazocin).
VAP recommended empirical therapy is piperacillin-tazobactam (Tazocin), adding vancomycin if there is MRSA risk.
For COPD exacerbation, antibiotics are recommended only if there is increased sputum purulence, sputum volume and dyspnoea; first-line is doxycycline and second-line amoxicillin.

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